Preview

Protein Purification

Better Essays
Open Document
Open Document
1222 Words
Grammar
Grammar
Plagiarism
Plagiarism
Writing
Writing
Score
Score
Protein Purification
Introduction

Protein purification is the series of processes to isolate a single type of protein from a complex mixture. This is vital to extract and characterize the protein of interest. However, before doing so, it is important to release the protein from the subcellular organelles. This step is also known as homogenization. This step can be done with the use of blender. As the solution was homogenized, it may undergo saltation or acidation to remove impurities such as calcium anions. Hexane may also be used to defat the protein. Lastly, the solution undergoes differential centrifugation. This will separate the protein crude from the liquid. (Campbell)

After protein purification, the crude now undergoes characterization. Activity assay, Bradford assay, and Warburg-Christian method can be used to characterize proteins. Spectrophotometric analysis are usually used to determine some properties of the protein such as protein concentration.

Results
Discussion
A. Invertase from yeast

The prepared yeast is first washed with hexane to defat the protein. After it, the yeast is grinded for 10-15 minutes and is later centrifuged. When the supernatant is clear, it is put in a pre-cooled beaker to prevent denaturation of protein because temperature affects the structure of the protein. Also, ethanol is added to remove some impurities because ethanol here acts as precipitating agent. Later on, the solution is once again centrifuged. The crude is weighed and is washed with acetone to fasten drying. It is then prepared for characterization.

B. Albumin from egg

Egg white is acquired because it is where albumin is present. It is gently stirred to prevent denaturation and to mix the enzymes present in it. Later on, it is added with 1.0 M HOAc to remove calcium anions present. Then, it is sent to the centrifuge. The precipitate collected is discarded because it contains contaminants which aren’t needed for the experiment. Also, according to Campbell, if the



References: [9] Farrugia A (January 2010). "Albumin usage in clinical medicine: tradition or therapeutic?".Transfus Med Rev 24 (1): 53–63. [12] Campbell and Farrell. Biochemistry, 4th Ed. Brooks/Cole. 2005. Pp. 116-130.

You May Also Find These Documents Helpful

  • Good Essays

    Erlenmeyer Synthesis

    • 998 Words
    • 4 Pages

    In the second separation of this experiment, the Erlenmeyer flask with the first filtrate was put into a beaker so the filtrate was in the beaker. The beaker was then heated on a hotplate until near boiling. After the whey protein had precipitated, a vacuum filter was used to filter out the whey. These proteins were then air-dried. A qualitative test was done to indicate that the sample extracted was the protein whey. Again, a small test tube was used and 2 mL of protein test solution was put in the tube. Five drops of 10% NaOH and 2 drops of 0.5% CuSO4 were added to this tube. If a purple color showed, it would indicate there was protein in the test tube.…

    • 998 Words
    • 4 Pages
    Good Essays
  • Better Essays

    Lab 3C Report

    • 958 Words
    • 3 Pages

    Like the previous experiments, the ultimate goal of this lab was to purify the enzyme sample. However, this is the last lab for purification and high level techniques of purification were employed to achieve this. Dialysis was used first, lowering the small-molecule concentration within the sample. Finally Affinity Chromatography on a Cibacron blue Sepharose stationary phase. Using BSA, which is analogous for BCA assays, a standardization was created to understand where the protein concentration was for each fraction.…

    • 958 Words
    • 3 Pages
    Better Essays
  • Better Essays

    Centrifugation would be carried out through RC-5B Refrigerated Superspeed Centrifuge. In chromatography, IMAC column would be used for peptide purification. UV-vis and SDS-PAGE would be our analytical tools. All equipment would be provided by…

    • 1049 Words
    • 5 Pages
    Better Essays
  • Good Essays

    The aim of this period of experiment is calculating the percentage of succinylation of the sample. Ninhydrin reacts with –NH2 to give a purple colour. There are three samples in the experiment: sample A, Sample B and Sample C. The sample A contains 2 distilled water and ninhydrin reagent. There are egg white and ninhydrin reagent in sample B. Succinylated egg white and ninhydrin reagent were in sample C. Because distilled water cannot react with ninhydrin reagent, the sample A was as a blank in the experiment. We measured the absorbance of the egg solution at 570nm. In sample B, the native egg white was added. The data of sample B shows the result…

    • 468 Words
    • 2 Pages
    Good Essays
  • Good Essays

    Next we centrifuge to separate soluble from insoluble then we do affinity chromatography which the nickel sticks to the His-tag, after that eluate imidazole, nxt we do size exclusion which separates small from big,big comes off first the imidazole captures it in the column next we do spectrophotometry. Then SDS-PAGE electrophoresis, size purity,enzyme test does its function. Finally we did DHFR enzymatic assay. In the SDS-PAGE electrophoresis we load the gel up with Laemmli buffer, precision plus protein standard,desalted eluate page, eluate page, wash page, flowthrough page, soluble page, insoluble page, inducted page, and uninducted page. The desalted eluate page is the sample of interest since it should have the highest OD₂₈₀ and have the highest enzyme…

    • 549 Words
    • 3 Pages
    Good Essays
  • Satisfactory Essays

    Chem Lab

    • 757 Words
    • 4 Pages

    From conical vial contents were then transferred to a clean centrifuge tube. The mixture was allowed to separate into two layers. Newly formed aqueous layer was removed with a plastic pipette and stored in a 50 ml beaker.…

    • 757 Words
    • 4 Pages
    Satisfactory Essays
  • Better Essays

    Trials of other resins in the affinity column would determine which resin would have the greatest outcome in the purification process. The Ni2+-NTA-Agarose resin was effective for this experiment, but testing other resins can determine if the Ni2+-NTA-Agarose resin was the best resin to use in this purification process. It also needs to be determined if running the protein through the column would have any effect on the dialysis process. This information can be determined by running dialysis with the crude sample and comparing the fold purity to the post-dialysis elution pool. Another future experiment, would be to determine which type of membrane used in the dialysis could affect the outcome of the fold purity.…

    • 1342 Words
    • 6 Pages
    Better Essays
  • Powerful Essays

    Macromolecules Lab Report

    • 1302 Words
    • 6 Pages

    Polyacrylamide gel electrophoresis (PAGE) is a commonly used method for separating proteins. Both SDS-PAGE and Simple-PAGE gels were prepared. The resolving layers for the SDS-PAGE and Simple-PAGE gels were prepared with 3.25mL water, 2.0mL 4X resolving buffer, 2.7mL 40% acrylamide solution, 80μL 10% APS, and 3μL TEMED. The stacking layers for the SDS-PAGE and Simple-PAGE gels were prepared with 4.6mL water, 2.0mL 4X stacking buffer, 1.3mL 40% acrylamide solution, 48μL 10% APS, and 5μL TEMED. The SDS-PAGE gel used the buffers containing SDS and the Simple-PAGE gels used the buffers without SDS.…

    • 1302 Words
    • 6 Pages
    Powerful Essays
  • Good Essays

    This allows an equal concentration of protein from each sample to be load into the wells later on when the gel electrophoresis is run. The Coomassie dye is brownish/red in color but turns blue when mixed with proteins. The blue color can be measured in a spectrophotometer at 595nm. A standard curve was generated using known amounts of bovine serum albumin (BSA). Four microfuge tubes were set up and 200ul of Bradford reagent were added to each tube and 1ul of whole cell extract was added to each appropriate tube. Entire sample of four tubes were transferred to four wells on 96-well microtiter plate. The Absorption at 595nm was measured for all of the samples and then…

    • 3079 Words
    • 13 Pages
    Good Essays
  • Powerful Essays

    carried out by the protein that makes up the majority of the protein composition of the…

    • 4754 Words
    • 20 Pages
    Powerful Essays
  • Good Essays

    Proteins are a group of organic compounds whose molecules consist of carbon, hydrogen, oxygen, nitrogen and sometimes sulfur atoms. They are condensation polymers of amino acids that are joined by strong peptide bonds. There are 20 different types of amino acids available, and the different combinations of these amino acids give it different structures and specific functions to it. Below in this essay, will illustrate the how different structure of a protein is related to its given function.…

    • 1362 Words
    • 6 Pages
    Good Essays
  • Better Essays

    Protein Synthesis

    • 2335 Words
    • 10 Pages

    The Earth has a plethora of organisms that live and reproduce all throughout its surface. Depending on what kind of organism, they go through some processes that others life-forms do not need to do. However, the molecules DNA and RNA, which are found in all living creatures, work together in a certain process that is crucial to existence: the formation of proteins. Although all species differ from each other in various ways, the processes by which proteins are synthesized are the same in all.…

    • 2335 Words
    • 10 Pages
    Better Essays
  • Better Essays

    Amino Acids

    • 2249 Words
    • 9 Pages

    Chromatography is a common technique for separating chemical substances. The prefix “chroma,” which suggests “color,” comes from the fact that some of the earliest applications of chromatography were to separate components of the green pigment, chlorophyll. You may have already used this method to separate the colored components in ink. In this experiment you will use chromatography to separate and identify amino acids, the building blocks of proteins. The proteins of all living things are composed of 20 different amino acids, some of which are described below. Chromatography is partially characterized by the medium on which the separation occurs. This medium is commonly identified as the “stationary phase”. Stationary phases that are typically used include paper (as in this experiment), thin plates coated with silica gel or alumina, or columns packed with the same substances. The “mobile phase” is the medium that accompanies the analyzed substance as it moves through the stationary phase. Both liquids and gases can be used as mobile phases depending on the type of separation desired. To refer to gas or liquid chromatography, chemists often use the abbreviations GC or LC, respectively. These abbreviations explicitly identify the phase of matter of the mobile phase. The term “paper chromatography” used in this experiment’s title identifies the composition of the stationary phase. The compositions of the stationary and mobile phases define a specific chromatographic method. Indeed, many different combinations are possible. However, all of the methods are based on the rate at which the analyzed substances migrate while in simultaneous contact with the stationary and mobile phases. The relative affinity of a substance for each phase depends on properties such as molecular weight, structure and shape of the molecule, and the polarity of the molecule. The relationship between molecular shape and polarity will be…

    • 2249 Words
    • 9 Pages
    Better Essays
  • Powerful Essays

    Table 2: Experimental protocol for determining the protein concentrations of silverbeet grown in the sun and shade…

    • 639 Words
    • 5 Pages
    Powerful Essays
  • Good Essays

    Protein Synthesis

    • 789 Words
    • 4 Pages

    Protein synthesis is one of the most fundamental biological processes. To start off, a protein is made in a ribosome. There are many cellular mechanisms involved with protein synthesis. Before the process of protein synthesis can be described, a person must know what proteins are made out of. There are four basic levels of protein organization. The first is primary structure, followed by secondary structure, then tertiary structure, and the last level is quaternary structure. Once someone understands the makeup of a protein, they can then begin to learn how elements can combine and go from genes to protein. There are two main processes that occur during protein synthesis, or peptide formation. One is transcription and the other is translation. Although these biological processes slightly differ for eukaryotes and prokaryotes, they are the basic mechanisms for which proteins are formed in all living organisms.…

    • 789 Words
    • 4 Pages
    Good Essays